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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_08400Chemotaxis protein CheZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)    
Predicted Functional Partners:
FP66_08395
Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
FP66_08360
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
FP66_08380
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
FP66_08385
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
motB
Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
FP66_08390
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
FP66_08035
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.918
fliA
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
FP66_03230
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.915
FP66_09360
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.915
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.