STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_09045Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
FP66_04295
30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
FP66_04290
Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
FP66_09050
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.748
FP66_15335
30S ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
FP66_05610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
FP66_03090
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.624
FP66_06775
Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.547
FP66_04355
Pyrroline-5-carboxylate dehydrogenase; Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.500
astD
A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.499
FP66_09625
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.497
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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