Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_09235Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)    
Predicted Functional Partners:
FP66_09230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.997
FP66_09225
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
dkgB
Catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.822
FP66_13690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.804
FP66_03600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.799
FP66_09080
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.702
FP66_08770
Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.695
FP66_01625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.658
FP66_01630
Peroxiredoxin OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.646
FP66_10845
Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.622
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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