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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_09855Thiamine-monophosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
FP66_14095
Thiamine-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.929
FP66_09850
Antitermination protein NusB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.895
FP66_09860
Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.885
FP66_10605
GTPase RsgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.884
FP66_09845
6,7-dimethyl-8-ribityllumazine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.876
FP66_09840
3,4-dihydroxy-2-butanone 4-phosphate synthase; Bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.858
FP66_02845
DNA repair protein RadA; Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.810
FP66_09865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
FP66_09835
Riboflavin biosynthesis protein RibD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.771
FP66_09870
Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.710
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.