Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FP66_12420Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
ppnK
Inorganic polyphosphate kinase; Catalyzes the phosphorylation of NAD to NADP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
FP66_12410
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
FP66_12405
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.667
FP66_12395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
FP66_12400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
FP66_12425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
FP66_02870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
FP66_07300
Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.500
FP66_04640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
FP66_09525
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.436
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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