Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP66_12965HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
FP66_12545
Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.891
FP66_00460
Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
glcE
Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
glcF
Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_03105
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.867
FP66_11855
Glycerate dehydrogenase; Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_12970
23S rRNA pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.815
FP66_12960
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.784
FP66_15215
Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.727
FP66_16085
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.637
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.