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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP66_13675Aminoacyl-histidine dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.937
pepN
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.924
FP66_01485
Cytosol aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.905
FP66_01770
Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.901
ggt
Gamma-glutamyltranspeptidase; Periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.894
FP66_14645
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.887
FP66_03980
NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.733
FP66_03560
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.697
FP66_05930
Catalyzes the conversion of O-succinylhomoserine into homocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.618
FP66_10905
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.618
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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