Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
FP66_13770Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
FP66_13765
Transmembrane pair domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.843
FP66_13775
D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.716
FP66_13780
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
FP66_13760
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
FP66_13785
Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.619
FP66_13745
Phosphopantetheine adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
FP66_13750
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
FP66_13755
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
FP66_14215
Multidrug transporter CflA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.428
FP66_13740
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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