Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_13775D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)    
Predicted Functional Partners:
FP66_00215
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.932
mtgA
Peptidoglycan transglycosylase; Glycosyltransferase; polymerizes glycan strands in the peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.921
FP66_07105
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.917
FP66_06265
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.916
FP66_06245
D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.900
FP66_13780
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.789
FP66_15880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.782
FP66_13770
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.716
FP66_13765
Transmembrane pair domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.715
FP66_13185
6-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.687
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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