Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP66_14845Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)    
Predicted Functional Partners:
FP66_09275
Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.807
FP66_09280
Cbb3-type cytochrome c oxidase subunit II; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.807
hemE
Uroporphyrinogen decarboxylase; Catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.805
FP66_09295
(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.796
FP66_01370
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.717
FP66_04335
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.694
FP66_04340
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.694
FP66_02610
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.681
FP66_09290
Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.598
gltB
Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.583
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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