Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FP66_148652-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)    
Predicted Functional Partners:
FP66_15220
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.927
ubiA
Catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.791
FP66_01865
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.713
FP66_10805
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
ubiE
Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.690
FP66_10150
Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.686
FP66_07745
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.683
FP66_01915
tRNA methyltransferase; Catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.666
FP66_09165
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.666
FP66_12580
Thiopurine S-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.666
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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