Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
FP66_15445NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
FP66_14495
NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.886
ubiE
Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.867
FP66_15450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
FP66_15440
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.811
FP66_08770
Fructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.757
FP66_03600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.716
FP66_13690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.696
FP66_15455
Pyridoxine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
FP66_00700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.646
FP66_09235
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.617
Your Current Organism:
Halomonas salina
NCBI taxonomy Id: 42565
Other names: ATCC 49509, CIP 106092, DSM 5928, Deleya salina, H. salina, JCM 21221, strain F8-11
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