Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
M446_0100PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rca:Rcas_2450 radical SAM domain protein. (705 aa)    
Predicted Functional Partners:
M446_3584
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rru:Rru_A0613 bacteriochlorophyll 4-vinyl reductase.
 
  
 0.835
M446_0101
KEGG: scl:sce8752 uncharacterized conserved protein.
       0.773
M446_0102
KEGG: fal:FRAAL6342 putative protein; putative signal peptide; putative O-methyltransferase.
       0.773
M446_0103
KEGG: scl:sce9070 hypothetical protein.
       0.773
M446_4997
PFAM: cobalamin B12-binding domain protein; KEGG: mbu:Mbur_1602 Fe-S protein, radical SAM family.
  
     0.703
M446_0098
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rca:Rcas_2450 radical SAM domain protein.
 
    
0.595
M446_0095
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pde:Pden_4198 radical SAM domain protein.
 
    
0.583
M446_0096
Hypothetical protein.
       0.570
M446_0097
KEGG: saq:Sare_4565 hypothetical protein.
       0.570
M446_0099
Hypothetical protein.
       0.570
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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