STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_0191PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0051 putative glycosyltransferase. (779 aa)    
Predicted Functional Partners:
M446_0192
PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0050 putative glycosyltransferase.
 
     0.915
M446_0195
KEGG: azc:AZC_0734 hypothetical protein.
 
     0.723
M446_0193
KEGG: jan:Jann_1557 hypothetical protein.
       0.689
M446_5188
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_0053 GDP-6-deoxy-D-lyxo-4-hexulose reductase.
  
    0.587
M446_0194
Hypothetical protein.
       0.570
M446_1070
PFAM: glycosyl transferase group 1; KEGG: sen:SACE_6474 glycosyl transferase, group 1.
  
     0.499
M446_6932
PFAM: glycosyl transferase group 1; KEGG: aae:aq_1080 hypothetical protein.
  
     0.492
M446_5069
PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4511 glycosyl transferase group 1.
 
     0.491
M446_1127
PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: bbt:BBta_5116 putative 1,4-alpha-glucan branching enzyme.
   
 0.449
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.449
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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