STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_0803KEGG: lpc:LPC_0212 hypothetical protein. (144 aa)    
Predicted Functional Partners:
M446_0804
Hypothetical protein.
       0.773
M446_0805
Hypothetical protein.
       0.613
M446_0802
Hypothetical protein.
       0.570
M446_0799
Hypothetical protein.
       0.559
M446_0800
Hypothetical protein.
       0.559
M446_0801
Hypothetical protein.
       0.559
M446_2143
KEGG: mex:Mext_1696 conserved hypothetical protein; putative signal peptide.
  
     0.448
M446_6903
KEGG: nwi:Nwi_1257 hypothetical protein.
  
     0.430
M446_2999
PFAM: acyltransferase 3; KEGG: ret:RHE_CH03393 probable acetyltransferase protein.
  
     0.418
M446_0810
PFAM: protein of unknown function DUF927; KEGG: gdi:GDI3600 hypothetical protein.
 
     0.413
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.