STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_0958PFAM: Integrase catalytic region; KEGG: rso:RS05623 probable transposase protein. (263 aa)    
Predicted Functional Partners:
M446_0959
PFAM: transposase IS3/IS911 family protein; KEGG: ypn:YPN_3423 helix-turn-helix, fis-type.
 
  
 0.953
M446_3339
PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3530 transposase IS3/IS911 family protein.
 
  
 0.800
M446_1010
KEGG: rsq:Rsph17025_3556 hypothetical protein.
 
  
 0.796
M446_1055
PFAM: Integrase catalytic region; KEGG: gsu:GSU3083 ISGsu7, transposase OrfB.
  
     0.485
M446_4287
PFAM: Integrase catalytic region; KEGG: gsu:GSU3083 ISGsu7, transposase OrfB.
  
     0.485
M446_6408
PFAM: Integrase catalytic region; KEGG: gsu:GSU3083 ISGsu7, transposase OrfB.
  
     0.485
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.