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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_1908PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: mex:Mext_0083 lytic transglycosylase catalytic. (340 aa)    
Predicted Functional Partners:
corA
Mg2 transporter protein CorA family protein; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.774
M446_1909
Hypothetical protein.
       0.773
M446_3947
KEGG: mex:Mext_0823 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.
 
  
 0.561
M446_2397
PFAM: Lytic transglycosylase catalytic; KEGG: mex:Mext_3465 lytic transglycosylase catalytic.
  
     0.481
M446_6505
KEGG: mex:Mext_0682 ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase.
  
  
 0.476
fliE
PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE.
  
  
 0.471
fliE-2
PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_2606 flagellar hook-basal body complex subunit FliE.
  
  
 0.471
M446_1907
PFAM: transposase mutator type; KEGG: rpc:RPC_3939 transposase, mutator type.
       0.459
M446_3056
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4830 MotA/TolQ/ExbB proton channel.
 
    0.450
M446_0698
PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; KEGG: mex:Mext_3190 lytic transglycosylase catalytic.
 
   
 0.401
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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