STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_2300PFAM: major facilitator superfamily MFS_1; KEGG: bpt:Bpet2649 putative transmembrane transport protein. (432 aa)    
Predicted Functional Partners:
M446_2299
PFAM: regulatory protein TetR; KEGG: bpe:BP2741 putative TetR-family transcriptional regulator.
 
     0.725
M446_3502
PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A0784 putative aldo/keto reductase family oxidoreductase.
  
    0.470
M446_1799
PFAM: Activator of Hsp90 ATPase 1 family protein; SMART: regulatory protein ArsR; KEGG: azc:AZC_3703 regulatory protein.
 
    0.464
M446_6139
PFAM: extracellular solute-binding protein family 1; KEGG: gur:Gura_1306 extracellular solute-binding protein, family 1.
 
    0.444
M446_2790
PFAM: Cupin 2 conserved barrel domain protein; KEGG: bra:BRADO2417 hypothetical protein.
 
     0.436
M446_0059
PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_01635 ABC-type Fe3+ transport system, periplasmic component.
 
    0.425
M446_2362
SMART: helix-turn-helix domain protein; KEGG: bch:Bcen2424_2428 transcriptional regulator, XRE family.
  
     0.408
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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