STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_4016PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator superfamily MFS_1. (444 aa)    
Predicted Functional Partners:
M446_6531
PFAM: major facilitator superfamily MFS_1; KEGG: pla:Plav_3596 major facilitator superfamily MFS_1.
  
  
 
0.909
M446_4017
PFAM: BLUF domain protein; KEGG: swi:Swit_4662 BLUF domain protein.
       0.510
M446_4015
Hypothetical protein; KEGG: amr:AM1_E0006 transposase, IS4 family, putative.
       0.478
M446_2482
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase.
 
   
 0.435
M446_4374
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase family 2.
 
   
 0.421
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.401
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.