STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_4188KEGG: mex:Mext_3043 hypothetical protein. (157 aa)    
Predicted Functional Partners:
M446_4189
KEGG: mex:Mext_3042 hypothetical protein.
 
     0.925
M446_4191
KEGG: mex:Mext_3040 hypothetical protein.
 
     0.847
M446_1118
KEGG: mex:Mext_0937 hypothetical protein.
  
     0.774
M446_2404
KEGG: mex:Mext_2109 hypothetical protein.
  
     0.774
M446_4201
KEGG: mex:Mext_3051 hypothetical protein.
  
     0.774
M446_5158
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein.
  
     0.771
M446_4186
KEGG: mex:Mext_0952 hypothetical protein.
  
     0.769
M446_0894
PFAM: flagellar FlaF family protein; KEGG: mex:Mext_1612 flagellar FlaF family protein.
 
     0.765
M446_5124
KEGG: mex:Mext_4090 putative flagellar assembly protein FliH.
  
     0.765
M446_6312
KEGG: mex:Mext_4168 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein.
  
     0.762
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.