STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_4506PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_4290 3-hydroxyacyl-CoA dehydrogenase NAD-binding. (318 aa)    
Predicted Functional Partners:
M446_4505
PFAM: protein of unknown function DUF849; KEGG: azc:AZC_2881 prokaryotic protein of unknown function.
 
  
 0.867
M446_2034
KEGG: xau:Xaut_1423 hypothetical protein.
   
 0.834
M446_6079
PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce8262 non-ribosomal peptide synthetase.
  
 
 0.801
M446_1246
KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.682
M446_5280
KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.682
M446_5626
KEGG: gsu:GSU3082 ISGsu7, transposase OrfA.
 
 
 0.678
M446_1054
KEGG: gsu:GSU3082 ISGsu7, transposase OrfA.
 
 
 0.677
M446_4288
KEGG: gsu:GSU3082 ISGsu7, transposase OrfA.
 
 
 0.677
M446_6409
KEGG: gsu:GSU3082 ISGsu7, transposase OrfA.
 
 
 0.677
M446_3176
PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B5853 protein of unknown function DUF849, prokaryotic.
 
  
 0.655
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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