STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_5523PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO3043 glutamine ABC transporter, ATP-binding protein. (260 aa)    
Predicted Functional Partners:
M446_5521
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1837 polar amino acid uptake family ABC transporter permease protein 1.
 
 0.997
M446_5522
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO3042 polar amino acid uptake family ABC transporter, permease protein.
 
 0.997
M446_5520
PFAM: extracellular solute-binding protein family 3; KEGG: sil:SPO2667 polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.905
M446_0115
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1838 polar amino acid uptake family ABC transporter permease protein 2.
 
 
 0.891
M446_0116
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1837 polar amino acid uptake family ABC transporter permease protein 1.
 
 
 0.889
M446_3588
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2225 amino acid ABC transporter permease protein.
 
 0.880
M446_3632
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr8118 ABC transporter permease protein.
 
 0.878
M446_4545
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3963 polar amino acid ABC transporter, inner membrane subunit.
 
 0.877
M446_3128
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_2073 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.874
M446_1743
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_4406 amino acid ABC transporter, permease protein.
 
 0.873
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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