STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_6560TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4101 drug resistance transporter, EmrB/QacA subfamily. (529 aa)    
Predicted Functional Partners:
M446_6561
PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4102 secretion protein HlyD family protein.
 
 
 0.976
M446_6591
PFAM: secretion protein HlyD family protein; KEGG: bja:blr7958 multidrug resistance efflux pump.
 
 
 0.890
M446_6562
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR.
 
     0.659
M446_0165
PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1810 hypothetical protein.
 
 
 0.536
M446_0082
PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO7122 putative HlyD-family secretion protein.
 
 
 0.442
M446_4866
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr3854 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.401
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.