STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_6593Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (506 aa)    
Predicted Functional Partners:
M446_0261
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase.
 
 
 0.764
M446_2959
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.609
M446_2711
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2893 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.604
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.604
M446_0133
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4909 ErfK/YbiS/YcfS/YnhG.
 
  
 0.603
M446_5998
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.602
M446_1046
KEGG: mex:Mext_0706 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
 
 
 0.601
M446_3650
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2880 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.600
M446_4450
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.595
M446_6604
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein.
 
  
 0.595
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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