STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_6861Transposase; KEGG: mlo:mll6033 transposase. (402 aa)    
Predicted Functional Partners:
M446_6909
PFAM: transposase IS4 family protein; KEGG: ret:RHE_PA00092 probable insertion sequence transposase protein, IS4 family.
 
   
 0.588
M446_2925
PFAM: transposase IS4 family protein; KEGG: gdi:GDI1551 putative transposase.
 
   
 0.505
M446_1477
KEGG: nha:Nham_3061 hypothetical protein.
  
     0.440
M446_2794
KEGG: nha:Nham_4600 feruloyl esterase.
  
     0.440
M446_6858
TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: bja:blr1277 malonate carrier protein.
       0.404
M446_6859
TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bja:blr1278 malonate transporter.
       0.404
M446_6860
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain protein.
       0.404
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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