Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES86831.1 | SES96188.1 | SAMN05660297_00782 | SAMN05660297_01021 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.957 |
SES86831.1 | SES97859.1 | SAMN05660297_00782 | SAMN05660297_01079 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Fumarate reductase flavoprotein subunit. | 0.780 |
SES86831.1 | SET09221.1 | SAMN05660297_00782 | SAMN05660297_01376 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.795 |
SES86831.1 | SET11028.1 | SAMN05660297_00782 | SAMN05660297_01437 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Glutamate synthase (NADPH/NADH) large chain. | 0.797 |
SES86831.1 | SET36865.1 | SAMN05660297_00782 | SAMN05660297_02176 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.795 |
SES86831.1 | SET46839.1 | SAMN05660297_00782 | SAMN05660297_02501 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.802 |
SES86831.1 | SET47446.1 | SAMN05660297_00782 | SAMN05660297_02527 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.850 |
SES86831.1 | SET50014.1 | SAMN05660297_00782 | SAMN05660297_02600 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.957 |
SES86831.1 | SET53047.1 | SAMN05660297_00782 | SAMN05660297_02697 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Fumarate reductase flavoprotein subunit. | 0.783 |
SES86831.1 | SET76603.1 | SAMN05660297_00782 | SAMN05660297_03435 | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Formate dehydrogenase major subunit. | 0.868 |
SES96188.1 | SES86831.1 | SAMN05660297_01021 | SAMN05660297_00782 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.957 |
SES96188.1 | SES97859.1 | SAMN05660297_01021 | SAMN05660297_01079 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Fumarate reductase flavoprotein subunit. | 0.997 |
SES96188.1 | SET09221.1 | SAMN05660297_01021 | SAMN05660297_01376 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SES96188.1 | SET11028.1 | SAMN05660297_01021 | SAMN05660297_01437 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glutamate synthase (NADPH/NADH) large chain. | 0.953 |
SES96188.1 | SET36865.1 | SAMN05660297_01021 | SAMN05660297_02176 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SES96188.1 | SET46839.1 | SAMN05660297_01021 | SAMN05660297_02501 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.969 |
SES96188.1 | SET47446.1 | SAMN05660297_01021 | SAMN05660297_02527 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. | 0.993 |
SES96188.1 | SET50014.1 | SAMN05660297_01021 | SAMN05660297_02600 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SES96188.1 | SET53047.1 | SAMN05660297_01021 | SAMN05660297_02697 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Fumarate reductase flavoprotein subunit. | 0.997 |
SES96188.1 | SET76603.1 | SAMN05660297_01021 | SAMN05660297_03435 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Formate dehydrogenase major subunit. | 0.994 |
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