Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES63489.1 | SES69029.1 | SAMN05660297_00016 | SAMN05660297_00258 | Aspartate aminotransferase. | L-aspartate aminotransferase apoenzyme. | 0.743 |
SES63489.1 | SES89608.1 | SAMN05660297_00016 | SAMN05660297_00899 | Aspartate aminotransferase. | Alanine dehydrogenase. | 0.564 |
SES63489.1 | SET06267.1 | SAMN05660297_00016 | SAMN05660297_01268 | Aspartate aminotransferase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.577 |
SES63489.1 | SET11028.1 | SAMN05660297_00016 | SAMN05660297_01437 | Aspartate aminotransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.919 |
SES63489.1 | lysA | SAMN05660297_00016 | SAMN05660297_03003 | Aspartate aminotransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.554 |
SES63489.1 | nadE | SAMN05660297_00016 | SAMN05660297_01112 | Aspartate aminotransferase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.400 |
SES69029.1 | SES63489.1 | SAMN05660297_00258 | SAMN05660297_00016 | L-aspartate aminotransferase apoenzyme. | Aspartate aminotransferase. | 0.743 |
SES69029.1 | SES89608.1 | SAMN05660297_00258 | SAMN05660297_00899 | L-aspartate aminotransferase apoenzyme. | Alanine dehydrogenase. | 0.564 |
SES69029.1 | SET06267.1 | SAMN05660297_00258 | SAMN05660297_01268 | L-aspartate aminotransferase apoenzyme. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.577 |
SES69029.1 | SET11028.1 | SAMN05660297_00258 | SAMN05660297_01437 | L-aspartate aminotransferase apoenzyme. | Glutamate synthase (NADPH/NADH) large chain. | 0.919 |
SES69029.1 | lysA | SAMN05660297_00258 | SAMN05660297_03003 | L-aspartate aminotransferase apoenzyme. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.554 |
SES69029.1 | nadE | SAMN05660297_00258 | SAMN05660297_01112 | L-aspartate aminotransferase apoenzyme. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.400 |
SES86452.1 | SES89608.1 | SAMN05660297_00768 | SAMN05660297_00899 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine dehydrogenase. | 0.631 |
SES86452.1 | SET06267.1 | SAMN05660297_00768 | SAMN05660297_01268 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.824 |
SES89608.1 | SES63489.1 | SAMN05660297_00899 | SAMN05660297_00016 | Alanine dehydrogenase. | Aspartate aminotransferase. | 0.564 |
SES89608.1 | SES69029.1 | SAMN05660297_00899 | SAMN05660297_00258 | Alanine dehydrogenase. | L-aspartate aminotransferase apoenzyme. | 0.564 |
SES89608.1 | SES86452.1 | SAMN05660297_00899 | SAMN05660297_00768 | Alanine dehydrogenase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.631 |
SES89608.1 | SET06267.1 | SAMN05660297_00899 | SAMN05660297_01268 | Alanine dehydrogenase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.972 |
SES89608.1 | SET11028.1 | SAMN05660297_00899 | SAMN05660297_01437 | Alanine dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.603 |
SES89608.1 | SET80022.1 | SAMN05660297_00899 | SAMN05660297_03547 | Alanine dehydrogenase. | Aspartate aminotransferase. | 0.718 |
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