Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES99385.1 | SES99414.1 | SAMN05660297_01129 | SAMN05660297_01130 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Protein of unknown function. | 0.526 |
SES99414.1 | SES99385.1 | SAMN05660297_01130 | SAMN05660297_01129 | Protein of unknown function. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.526 |
SES99414.1 | SET29458.1 | SAMN05660297_01130 | SAMN05660297_01956 | Protein of unknown function. | EamA-like transporter family protein. | 0.402 |
SES99414.1 | SET34846.1 | SAMN05660297_01130 | SAMN05660297_02137 | Protein of unknown function. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.402 |
SES99414.1 | SET50615.1 | SAMN05660297_01130 | SAMN05660297_02623 | Protein of unknown function. | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | 0.438 |
SET29458.1 | SES99414.1 | SAMN05660297_01956 | SAMN05660297_01130 | EamA-like transporter family protein. | Protein of unknown function. | 0.402 |
SET29458.1 | SET50615.1 | SAMN05660297_01956 | SAMN05660297_02623 | EamA-like transporter family protein. | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | 0.459 |
SET34846.1 | SES99414.1 | SAMN05660297_02137 | SAMN05660297_01130 | Permease of the drug/metabolite transporter (DMT) superfamily. | Protein of unknown function. | 0.402 |
SET50615.1 | SES99414.1 | SAMN05660297_02623 | SAMN05660297_01130 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Protein of unknown function. | 0.438 |
SET50615.1 | SET29458.1 | SAMN05660297_02623 | SAMN05660297_01956 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | EamA-like transporter family protein. | 0.459 |