Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES96388.1 | SET11028.1 | SAMN05660297_01029 | SAMN05660297_01437 | Signal transduction histidine kinase. | Glutamate synthase (NADPH/NADH) large chain. | 0.910 |
SES96388.1 | SET35005.1 | SAMN05660297_01029 | SAMN05660297_02146 | Signal transduction histidine kinase. | AraC-type DNA-binding protein. | 0.489 |
SES96388.1 | SET35024.1 | SAMN05660297_01029 | SAMN05660297_02147 | Signal transduction histidine kinase. | Na+/melibiose symporter. | 0.457 |
SES96388.1 | SET36796.1 | SAMN05660297_01029 | SAMN05660297_02173 | Signal transduction histidine kinase. | Hypothetical protein. | 0.998 |
SES96388.1 | SET50139.1 | SAMN05660297_01029 | SAMN05660297_02605 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SET11028.1 | SES96388.1 | SAMN05660297_01437 | SAMN05660297_01029 | Glutamate synthase (NADPH/NADH) large chain. | Signal transduction histidine kinase. | 0.910 |
SET11028.1 | SET26920.1 | SAMN05660297_01437 | SAMN05660297_01852 | Glutamate synthase (NADPH/NADH) large chain. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.629 |
SET11028.1 | SET35005.1 | SAMN05660297_01437 | SAMN05660297_02146 | Glutamate synthase (NADPH/NADH) large chain. | AraC-type DNA-binding protein. | 0.776 |
SET11028.1 | SET35024.1 | SAMN05660297_01437 | SAMN05660297_02147 | Glutamate synthase (NADPH/NADH) large chain. | Na+/melibiose symporter. | 0.527 |
SET11028.1 | SET35043.1 | SAMN05660297_01437 | SAMN05660297_02148 | Glutamate synthase (NADPH/NADH) large chain. | Phosphoenolpyruvate synthase. | 0.523 |
SET11028.1 | SET36796.1 | SAMN05660297_01437 | SAMN05660297_02173 | Glutamate synthase (NADPH/NADH) large chain. | Hypothetical protein. | 0.688 |
SET11028.1 | SET50139.1 | SAMN05660297_01437 | SAMN05660297_02605 | Glutamate synthase (NADPH/NADH) large chain. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.759 |
SET26920.1 | SET11028.1 | SAMN05660297_01852 | SAMN05660297_01437 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Glutamate synthase (NADPH/NADH) large chain. | 0.629 |
SET26920.1 | SET35024.1 | SAMN05660297_01852 | SAMN05660297_02147 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Na+/melibiose symporter. | 0.691 |
SET26920.1 | SET36796.1 | SAMN05660297_01852 | SAMN05660297_02173 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Hypothetical protein. | 0.891 |
SET26920.1 | SET50139.1 | SAMN05660297_01852 | SAMN05660297_02605 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.551 |
SET30539.1 | SET35024.1 | SAMN05660297_02003 | SAMN05660297_02147 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Na+/melibiose symporter. | 0.446 |
SET30539.1 | SET36796.1 | SAMN05660297_02003 | SAMN05660297_02173 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.792 |
SET30539.1 | SET50139.1 | SAMN05660297_02003 | SAMN05660297_02605 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.760 |
SET30539.1 | SET59290.1 | SAMN05660297_02003 | SAMN05660297_02862 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.548 |
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