STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET37600.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (636 aa)    
Predicted Functional Partners:
SET36796.1
Hypothetical protein.
 
 0.994
SET11638.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.989
SET50139.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 0.979
SET36823.1
Signal transduction histidine kinase.
  
 0.954
SET74045.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.952
SET45801.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.951
SES97617.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.945
SES96388.1
Signal transduction histidine kinase.
 
 0.936
SET34684.1
GAF domain-containing protein.
 
0.928
SET69487.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.879
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.