Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES63202.1 | SES88062.1 | SAMN05660297_00002 | SAMN05660297_00835 | Signal transduction histidine kinase. | Amino acid-binding domain sensor histidine kinase. | 0.825 |
SES63202.1 | SES96388.1 | SAMN05660297_00002 | SAMN05660297_01029 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.970 |
SES63202.1 | SES97166.1 | SAMN05660297_00002 | SAMN05660297_01055 | Signal transduction histidine kinase. | Heavy metal sensor kinase. | 0.746 |
SES63202.1 | SET11638.1 | SAMN05660297_00002 | SAMN05660297_01461 | Signal transduction histidine kinase. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.920 |
SES63202.1 | SET36796.1 | SAMN05660297_00002 | SAMN05660297_02173 | Signal transduction histidine kinase. | Hypothetical protein. | 0.993 |
SES63202.1 | SET36823.1 | SAMN05660297_00002 | SAMN05660297_02174 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.695 |
SES63202.1 | SET40382.1 | SAMN05660297_00002 | SAMN05660297_02288 | Signal transduction histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.917 |
SES63202.1 | SET50139.1 | SAMN05660297_00002 | SAMN05660297_02605 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.999 |
SES63202.1 | SET54529.1 | SAMN05660297_00002 | SAMN05660297_02711 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.572 |
SES63202.1 | SET82900.1 | SAMN05660297_00002 | SAMN05660297_03632 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.561 |
SES88062.1 | SES63202.1 | SAMN05660297_00835 | SAMN05660297_00002 | Amino acid-binding domain sensor histidine kinase. | Signal transduction histidine kinase. | 0.825 |
SES88062.1 | SES96388.1 | SAMN05660297_00835 | SAMN05660297_01029 | Amino acid-binding domain sensor histidine kinase. | Signal transduction histidine kinase. | 0.962 |
SES88062.1 | SES97166.1 | SAMN05660297_00835 | SAMN05660297_01055 | Amino acid-binding domain sensor histidine kinase. | Heavy metal sensor kinase. | 0.409 |
SES88062.1 | SET11638.1 | SAMN05660297_00835 | SAMN05660297_01461 | Amino acid-binding domain sensor histidine kinase. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.947 |
SES88062.1 | SET36796.1 | SAMN05660297_00835 | SAMN05660297_02173 | Amino acid-binding domain sensor histidine kinase. | Hypothetical protein. | 0.993 |
SES88062.1 | SET36823.1 | SAMN05660297_00835 | SAMN05660297_02174 | Amino acid-binding domain sensor histidine kinase. | Signal transduction histidine kinase. | 0.947 |
SES88062.1 | SET40382.1 | SAMN05660297_00835 | SAMN05660297_02288 | Amino acid-binding domain sensor histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.909 |
SES88062.1 | SET50139.1 | SAMN05660297_00835 | SAMN05660297_02605 | Amino acid-binding domain sensor histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.980 |
SES88062.1 | SET54529.1 | SAMN05660297_00835 | SAMN05660297_02711 | Amino acid-binding domain sensor histidine kinase. | PAS domain S-box-containing protein. | 0.922 |
SES88062.1 | SET82900.1 | SAMN05660297_00835 | SAMN05660297_03632 | Amino acid-binding domain sensor histidine kinase. | PAS domain S-box-containing protein. | 0.926 |
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