STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET54659.1Penicillin-binding protein 1A. (1014 aa)    
Predicted Functional Partners:
SES64541.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
0.934
SES65681.1
Cell division initiation protein.
   
 
 0.867
SES74865.1
Penicillin-binding protein 2.
 
 
 0.817
SES71708.1
Penicillin-binding protein 2.
 
 
 0.796
SES70280.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.771
SES82551.1
Peptidoglycan glycosyltransferase.
 
 
0.751
SES87604.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.748
SES70069.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.668
SES74146.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.668
SET05214.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
  
   
 0.630
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
Server load: low (20%) [HD]