Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES63387.1 | SET59270.1 | SAMN05660297_00011 | SAMN05660297_02861 | 2,4-dienoyl-CoA reductase. | NAD-dependent deacetylase. | 0.594 |
SES63387.1 | nadE | SAMN05660297_00011 | SAMN05660297_01112 | 2,4-dienoyl-CoA reductase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.849 |
SES63387.1 | nadK | SAMN05660297_00011 | SAMN05660297_03149 | 2,4-dienoyl-CoA reductase. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.501 |
SES70327.1 | SET00768.1 | SAMN05660297_00310 | SAMN05660297_01178 | Hypothetical protein. | Purine-nucleoside phosphorylase. | 0.843 |
SES70327.1 | SET44979.1 | SAMN05660297_00310 | SAMN05660297_02425 | Hypothetical protein. | Nicotinamidase-related amidase. | 0.427 |
SES70327.1 | SET52680.1 | SAMN05660297_00310 | SAMN05660297_02676 | Hypothetical protein. | Nicotinamidase-related amidase. | 0.779 |
SES70327.1 | SET59270.1 | SAMN05660297_00310 | SAMN05660297_02861 | Hypothetical protein. | NAD-dependent deacetylase. | 0.748 |
SES70327.1 | nadD | SAMN05660297_00310 | SAMN05660297_00478 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.433 |
SES70327.1 | nadE | SAMN05660297_00310 | SAMN05660297_01112 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.453 |
SES97247.1 | SET59270.1 | SAMN05660297_01058 | SAMN05660297_02861 | ATP-dependent DNA helicase, RecQ-like. | NAD-dependent deacetylase. | 0.631 |
SET00768.1 | SES70327.1 | SAMN05660297_01178 | SAMN05660297_00310 | Purine-nucleoside phosphorylase. | Hypothetical protein. | 0.843 |
SET00768.1 | SET44979.1 | SAMN05660297_01178 | SAMN05660297_02425 | Purine-nucleoside phosphorylase. | Nicotinamidase-related amidase. | 0.690 |
SET00768.1 | SET52680.1 | SAMN05660297_01178 | SAMN05660297_02676 | Purine-nucleoside phosphorylase. | Nicotinamidase-related amidase. | 0.768 |
SET00768.1 | SET59270.1 | SAMN05660297_01178 | SAMN05660297_02861 | Purine-nucleoside phosphorylase. | NAD-dependent deacetylase. | 0.772 |
SET00768.1 | nadD | SAMN05660297_01178 | SAMN05660297_00478 | Purine-nucleoside phosphorylase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.491 |
SET44979.1 | SES70327.1 | SAMN05660297_02425 | SAMN05660297_00310 | Nicotinamidase-related amidase. | Hypothetical protein. | 0.427 |
SET44979.1 | SET00768.1 | SAMN05660297_02425 | SAMN05660297_01178 | Nicotinamidase-related amidase. | Purine-nucleoside phosphorylase. | 0.690 |
SET44979.1 | SET59270.1 | SAMN05660297_02425 | SAMN05660297_02861 | Nicotinamidase-related amidase. | NAD-dependent deacetylase. | 0.643 |
SET44979.1 | cinA | SAMN05660297_02425 | SAMN05660297_01875 | Nicotinamidase-related amidase. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.546 |
SET44979.1 | nadE | SAMN05660297_02425 | SAMN05660297_01112 | Nicotinamidase-related amidase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.541 |
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