STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET75101.1Fumarate hydratase subunit alpha. (280 aa)    
Predicted Functional Partners:
SET75118.1
Fumarate hydratase subunit beta.
 
 0.997
SET71073.1
Fumarate hydratase subunit beta.
 
 0.992
SET53047.1
Fumarate reductase flavoprotein subunit.
  
 
 0.877
SES97859.1
Fumarate reductase flavoprotein subunit.
  
 
 0.850
SET76603.1
Formate dehydrogenase major subunit.
    
 0.835
SET16151.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.784
SET50375.1
Malate/lactate dehydrogenase.
  
 
 0.743
SES69172.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.740
SET68990.1
Phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
   
 
 0.736
SES96188.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.727
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.