STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET75118.1Fumarate hydratase subunit beta. (181 aa)    
Predicted Functional Partners:
SET75101.1
Fumarate hydratase subunit alpha.
 
 0.997
SET71049.1
Fumarase, class I alpha subunit.
 
 0.995
SET16151.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
 
 
 0.871
SET53047.1
Fumarate reductase flavoprotein subunit.
  
 
 0.867
SES97859.1
Fumarate reductase flavoprotein subunit.
  
 
 0.855
SET76603.1
Formate dehydrogenase major subunit.
    
 0.830
argH
Argininosuccinate lyase.
    
 0.763
SET50375.1
Malate/lactate dehydrogenase.
  
 
 0.743
SET75133.1
Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
    0.741
SES69172.1
Oxaloacetate decarboxylase, alpha subunit.
    
 0.740
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.