STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET77638.1Protein of unknown function. (173 aa)    
Predicted Functional Partners:
SET59862.1
Single-strand binding protein family protein.
 
     0.833
SET01635.1
DnaD and phage-associated domain-containing protein.
  
     0.748
SET01657.1
DNA replication protein DnaC.
  
     0.717
SET23189.1
Hypothetical protein.
  
     0.591
SET23592.1
DNA polymerase III, delta prime subunit.
  
    0.585
SES94695.1
LysM domain-containing protein.
  
     0.569
SET48770.1
Small, acid-soluble spore protein, alpha/beta type.
  
     0.526
SES69342.1
Transcriptional regulator, RpiR family.
  
     0.510
SET77619.1
Protein of unknown function.
       0.507
SET77603.1
Uncharacterized membrane protein YcaP, DUF421 family.
       0.492
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.