Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES65253.1 | SES89825.1 | SAMN05660297_00102 | SAMN05660297_00904 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase PcrA. | 0.832 |
SES65253.1 | SET80430.1 | SAMN05660297_00102 | SAMN05660297_03560 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.817 |
SES65253.1 | addA | SAMN05660297_00102 | SAMN05660297_01307 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase. | 0.519 |
SES65253.1 | rpoB | SAMN05660297_00102 | SAMN05660297_03501 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.721 |
SES65253.1 | rpoC | SAMN05660297_00102 | SAMN05660297_03502 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.459 |
SES89825.1 | SES65253.1 | SAMN05660297_00904 | SAMN05660297_00102 | ATP-dependent DNA helicase PcrA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.832 |
SES89825.1 | SET80430.1 | SAMN05660297_00904 | SAMN05660297_03560 | ATP-dependent DNA helicase PcrA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.823 |
SES89825.1 | addA | SAMN05660297_00904 | SAMN05660297_01307 | ATP-dependent DNA helicase PcrA. | DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase. | 0.639 |
SES89825.1 | rpoA | SAMN05660297_00904 | SAMN05660297_02796 | ATP-dependent DNA helicase PcrA. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.474 |
SES89825.1 | rpoB | SAMN05660297_00904 | SAMN05660297_03501 | ATP-dependent DNA helicase PcrA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.756 |
SES89825.1 | rpoC | SAMN05660297_00904 | SAMN05660297_03502 | ATP-dependent DNA helicase PcrA. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.553 |
SET23931.1 | SET80430.1 | SAMN05660297_01792 | SAMN05660297_03560 | Cobalt-precorrin 3 C17-methyltransferase. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.461 |
SET23931.1 | cobS | SAMN05660297_01792 | SAMN05660297_02022 | Cobalt-precorrin 3 C17-methyltransferase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.994 |
SET54400.1 | SET80430.1 | SAMN05660297_02706 | SAMN05660297_03560 | Hypothetical protein. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.522 |
SET80430.1 | SES65253.1 | SAMN05660297_03560 | SAMN05660297_00102 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.817 |
SET80430.1 | SES89825.1 | SAMN05660297_03560 | SAMN05660297_00904 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase PcrA. | 0.823 |
SET80430.1 | SET23931.1 | SAMN05660297_03560 | SAMN05660297_01792 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Cobalt-precorrin 3 C17-methyltransferase. | 0.461 |
SET80430.1 | SET54400.1 | SAMN05660297_03560 | SAMN05660297_02706 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Hypothetical protein. | 0.522 |
SET80430.1 | addA | SAMN05660297_03560 | SAMN05660297_01307 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA helicase/exodeoxyribonuclease V, subunit A; ATP-dependent DNA helicase. | 0.603 |
SET80430.1 | cobS | SAMN05660297_03560 | SAMN05660297_02022 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.668 |
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