Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES90361.1 | SET80794.1 | SAMN05660297_00923 | SAMN05660297_03575 | Transposase. | Helix-turn-helix domain-containing protein. | 0.655 |
SES90361.1 | SET83873.1 | SAMN05660297_00923 | SAMN05660297_03657 | Transposase. | Transposase InsO and inactivated derivatives. | 0.539 |
SET10269.1 | SET80794.1 | SAMN05660297_01412 | SAMN05660297_03575 | Molybdopterin synthase sulfur carrier subunit. | Helix-turn-helix domain-containing protein. | 0.441 |
SET75825.1 | SET80794.1 | SAMN05660297_03402 | SAMN05660297_03575 | Transposase. | Helix-turn-helix domain-containing protein. | 0.655 |
SET75825.1 | SET83873.1 | SAMN05660297_03402 | SAMN05660297_03657 | Transposase. | Transposase InsO and inactivated derivatives. | 0.539 |
SET80777.1 | SET80794.1 | SAMN05660297_03574 | SAMN05660297_03575 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.477 |
SET80794.1 | SES90361.1 | SAMN05660297_03575 | SAMN05660297_00923 | Helix-turn-helix domain-containing protein. | Transposase. | 0.655 |
SET80794.1 | SET10269.1 | SAMN05660297_03575 | SAMN05660297_01412 | Helix-turn-helix domain-containing protein. | Molybdopterin synthase sulfur carrier subunit. | 0.441 |
SET80794.1 | SET75825.1 | SAMN05660297_03575 | SAMN05660297_03402 | Helix-turn-helix domain-containing protein. | Transposase. | 0.655 |
SET80794.1 | SET80777.1 | SAMN05660297_03575 | SAMN05660297_03574 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.477 |
SET80794.1 | SET83873.1 | SAMN05660297_03575 | SAMN05660297_03657 | Helix-turn-helix domain-containing protein. | Transposase InsO and inactivated derivatives. | 0.400 |
SET83873.1 | SES90361.1 | SAMN05660297_03657 | SAMN05660297_00923 | Transposase InsO and inactivated derivatives. | Transposase. | 0.539 |
SET83873.1 | SET75825.1 | SAMN05660297_03657 | SAMN05660297_03402 | Transposase InsO and inactivated derivatives. | Transposase. | 0.539 |
SET83873.1 | SET80794.1 | SAMN05660297_03657 | SAMN05660297_03575 | Transposase InsO and inactivated derivatives. | Helix-turn-helix domain-containing protein. | 0.400 |