STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET82109.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (221 aa)    
Predicted Functional Partners:
SES96388.1
Signal transduction histidine kinase.
 0.995
SET50139.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
0.993
SET36796.1
Hypothetical protein.
 
0.991
SES63202.1
Signal transduction histidine kinase.
 0.959
SET54529.1
PAS domain S-box-containing protein.
 0.953
SET82900.1
PAS domain S-box-containing protein.
 0.949
SES88062.1
Amino acid-binding domain sensor histidine kinase.
 
 
 0.899
SET11638.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.888
SES83915.1
Signal transduction histidine kinase.
 0.876
SET37882.1
Signal transduction histidine kinase.
 0.872
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.