Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES64541.1 | SES66217.1 | SAMN05660297_00069 | SAMN05660297_00140 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Serine/threonine protein kinase. | 0.740 |
SES64541.1 | SES96388.1 | SAMN05660297_00069 | SAMN05660297_01029 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Signal transduction histidine kinase. | 0.845 |
SES64541.1 | SET36796.1 | SAMN05660297_00069 | SAMN05660297_02173 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Hypothetical protein. | 0.753 |
SES64541.1 | SET50139.1 | SAMN05660297_00069 | SAMN05660297_02605 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.435 |
SES64541.1 | SET59909.1 | SAMN05660297_00069 | SAMN05660297_02893 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | TPR repeat-containing protein. | 0.518 |
SES64541.1 | SET69487.1 | SAMN05660297_00069 | SAMN05660297_03181 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.518 |
SES64541.1 | SET83018.1 | SAMN05660297_00069 | SAMN05660297_03634 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Hypothetical protein. | 0.732 |
SES64541.1 | ribBA | SAMN05660297_00069 | SAMN05660297_02980 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.405 |
SES66217.1 | SES64541.1 | SAMN05660297_00140 | SAMN05660297_00069 | Serine/threonine protein kinase. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.740 |
SES66217.1 | SES96388.1 | SAMN05660297_00140 | SAMN05660297_01029 | Serine/threonine protein kinase. | Signal transduction histidine kinase. | 0.972 |
SES66217.1 | SET34723.1 | SAMN05660297_00140 | SAMN05660297_02132 | Serine/threonine protein kinase. | Adenylate cyclase. | 0.805 |
SES66217.1 | SET36796.1 | SAMN05660297_00140 | SAMN05660297_02173 | Serine/threonine protein kinase. | Hypothetical protein. | 0.950 |
SES66217.1 | SET46839.1 | SAMN05660297_00140 | SAMN05660297_02501 | Serine/threonine protein kinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.799 |
SES66217.1 | SET50139.1 | SAMN05660297_00140 | SAMN05660297_02605 | Serine/threonine protein kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.894 |
SES66217.1 | SET59909.1 | SAMN05660297_00140 | SAMN05660297_02893 | Serine/threonine protein kinase. | TPR repeat-containing protein. | 0.632 |
SES66217.1 | SET69487.1 | SAMN05660297_00140 | SAMN05660297_03181 | Serine/threonine protein kinase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.559 |
SES66217.1 | SET83018.1 | SAMN05660297_00140 | SAMN05660297_03634 | Serine/threonine protein kinase. | Hypothetical protein. | 0.904 |
SES66217.1 | ribBA | SAMN05660297_00140 | SAMN05660297_02980 | Serine/threonine protein kinase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.857 |
SES96388.1 | SES64541.1 | SAMN05660297_01029 | SAMN05660297_00069 | Signal transduction histidine kinase. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.845 |
SES96388.1 | SES66217.1 | SAMN05660297_01029 | SAMN05660297_00140 | Signal transduction histidine kinase. | Serine/threonine protein kinase. | 0.972 |
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