STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET83018.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SET36796.1
Hypothetical protein.
  
 
 0.917
SET59909.1
TPR repeat-containing protein.
  
 0.912
SES66217.1
Serine/threonine protein kinase.
   
 
 0.904
SET50139.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
 0.815
SET34723.1
Adenylate cyclase.
    
 0.807
SES96388.1
Signal transduction histidine kinase.
    
 0.791
SET46839.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.777
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.771
SET69487.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.735
SES64541.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
   
 
 0.732
Your Current Organism:
Natronincola peptidivorans
NCBI taxonomy Id: 426128
Other names: DSM 18979, N. peptidivorans, Natronincola peptidivorans corrig. Zhilina et al. 2009, Natronincola peptidovorans, VKM B-2503, strain Z-7031
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