STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB22156.1PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_2743 alpha/beta hydrolase fold. (338 aa)    
Predicted Functional Partners:
ACB22157.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2742 tetratricopeptide TPR_2 repeat protein.
 
   0.854
ACB22962.1
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase.
  
 
 0.785
rpmJ
TIGRFAM: ribosomal protein L36; KEGG: mex:Mext_2741 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
       0.551
ACB23134.1
PFAM: protein of unknown function DUF29; KEGG: rru:Rru_A3208 protein of unknown function DUF29.
  
 
  0.537
ACB25675.1
PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29.
  
 
  0.534
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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