STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB22330.1PFAM: polysaccharide deacetylase; KEGG: mex:Mext_1604 polysaccharide deacetylase. (353 aa)    
Predicted Functional Partners:
ACB22331.1
KEGG: mex:Mext_1603 conserved hypothetical protein; putative acyl-CoA N-acyltransferase related protein.
 
     0.882
ACB25660.1
PFAM: O-antigen polymerase; KEGG: mex:Mext_1781 hypothetical protein.
 
   
 0.786
ACB24368.1
PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein.
 
   
 0.774
ACB22332.1
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_1859 lipopolysaccharide biosynthesis protein.
 
     0.761
ACB24695.1
PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1857 glycosyl transferase group 1.
 
  
 0.761
ACB26598.1
PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_2258 type IV pilus assembly PilZ.
  
     0.743
ACB22101.1
KEGG: mex:Mext_3606 conserved hypothetical protein.
 
     0.736
ACB25164.1
PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3.
  
     0.726
ACB22887.1
PFAM: protein of unknown function DUF1214; KEGG: mex:Mext_0927 protein of unknown function DUF1214.
  
     0.696
ACB25557.1
PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 tetratricopeptide TPR_2 repeat protein.
 
  
 0.689
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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