STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB22980.1TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: mex:Mext_3458 hopanoid biosynthesis associated RND transporter like protein HpnN. (895 aa)    
Predicted Functional Partners:
ACB22979.1
TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: mex:Mext_3460 hopanoid biosynthesis associated radical SAM protein HpnH.
 
   
 0.826
ACB27374.1
KEGG: mex:Mext_3461 hypothetical protein.
 
     0.802
ACB27373.1
KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
 
     0.800
ACB27009.1
KEGG: mex:Mext_4083 hypothetical protein.
 
     0.781
ACB22986.1
TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: mex:Mext_3452 membrane protein.
 
     0.780
ACB27369.1
TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_1940 hopanoid-associated sugar epimerase.
  
   
 0.758
ACB27372.1
TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase.
  
     0.730
ACB22985.1
PFAM: toluene tolerance family protein; KEGG: mex:Mext_3453 toluene tolerance family protein.
 
     0.660
ACB22983.1
KEGG: mex:Mext_3455 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
     0.626
ACB22984.1
TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3454 putative glucosyltransferase.
 
   
 0.610
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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