STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB23134.1PFAM: protein of unknown function DUF29; KEGG: rru:Rru_A3208 protein of unknown function DUF29. (164 aa)    
Predicted Functional Partners:
ACB22818.1
PFAM: Ankyrin; KEGG: mex:Mext_4065 ankyrin.
   
 0.841
ACB22944.1
PFAM: Ankyrin; KEGG: xcv:XCV3038 putative phospholipase accessory protein.
   
 0.841
apaG
PFAM: ApaG domain protein; KEGG: mex:Mext_0370 ApaG domain protein.
  
  
 0.831
ACB25175.1
PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mex:Mext_2844 WD-40 repeat protein.
   
 0.821
ACB22118.1
KEGG: mex:Mext_2336 WD-40 repeat protein.
   
 0.814
ACB25675.1
PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29.
  
     0.768
ACB22810.1
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mex:Mext_4646 peptidylprolyl isomerase FKBP-type.
   
 0.752
ACB23135.1
PFAM: BolA family protein; KEGG: mex:Mext_0012 BolA family protein; Belongs to the BolA/IbaG family.
  
    0.747
ACB25668.1
KEGG: mex:Mext_3236 putative mRNA 3-end processing factor.
   
 
 0.699
ACB23133.1
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mex:Mext_0013 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
    0.692
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.