Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACB22558.1 | ACB23295.1 | Mrad2831_0547 | Mrad2831_1296 | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | 0.531 |
ACB22558.1 | pyrE | Mrad2831_0547 | Mrad2831_5320 | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.995 |
ACB22558.1 | pyrF | Mrad2831_0547 | Mrad2831_1753 | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.948 |
ACB23295.1 | ACB22558.1 | Mrad2831_1296 | Mrad2831_0547 | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.531 |
ACB23295.1 | ACB23296.1 | Mrad2831_1296 | Mrad2831_1297 | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | SMART: extracellular solute-binding protein family 3; KEGG: bja:bll6724 hypothetical protein. | 0.545 |
ACB23295.1 | pyrE | Mrad2831_1296 | Mrad2831_5320 | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.616 |
ACB23295.1 | pyrF | Mrad2831_1296 | Mrad2831_1753 | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.610 |
ACB23296.1 | ACB23295.1 | Mrad2831_1297 | Mrad2831_1296 | SMART: extracellular solute-binding protein family 3; KEGG: bja:bll6724 hypothetical protein. | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | 0.545 |
pyrE | ACB22558.1 | Mrad2831_5320 | Mrad2831_0547 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.995 |
pyrE | ACB23295.1 | Mrad2831_5320 | Mrad2831_1296 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | 0.616 |
pyrE | pyrF | Mrad2831_5320 | Mrad2831_1753 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.997 |
pyrF | ACB22558.1 | Mrad2831_1753 | Mrad2831_0547 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.948 |
pyrF | ACB23295.1 | Mrad2831_1753 | Mrad2831_1296 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606. | 0.610 |
pyrF | pyrE | Mrad2831_1753 | Mrad2831_5320 | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.997 |