STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB23317.1PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0508 glycosyl transferase group 1. (377 aa)    
Predicted Functional Partners:
ACB23319.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: mex:Mext_0510 NAD-dependent epimerase/dehydratase.
 
  
 0.966
ACB23316.1
KEGG: mex:Mext_0507 hypothetical protein.
    0.959
ACB23320.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: mex:Mext_0511 NAD-dependent epimerase/dehydratase.
 
    0.956
ACB23315.1
KEGG: mex:Mext_0246 hypothetical protein.
 
    0.955
ACB23314.1
KEGG: mex:Mext_0505 hypothetical protein.
 
    0.953
ACB23318.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_0249 radical SAM domain protein.
 
     0.939
ACB23309.1
KEGG: mex:Mext_0240 hypothetical protein.
 
    0.887
ACB23310.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_0241 methyltransferase type 11.
 
     0.882
ACB23313.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0504 NAD-dependent epimerase/dehydratase.
 
    0.818
ACB23312.1
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_0503 myo-inositol-1-phosphate synthase.
 
   
 0.778
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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