STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB24070.1Catalase; PFAM: manganese containing catalase; KEGG: mex:Mext_2775 catalase. (285 aa)    
Predicted Functional Partners:
ACB23754.1
PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 protein of unknown function DUF892.
 
    0.854
ACB27193.1
PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3624 hypothetical protein.
 
    0.845
ACB23628.1
PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3614 protein of unknown function DUF892.
    0.827
ACB26203.1
PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 protein of unknown function DUF892.
 
    0.827
ACB26463.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.796
ACB22840.1
KEGG: mex:Mext_2717 radical SAM domain protein.
  
     0.675
ACB24422.1
PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4154 beta-lactamase domain protein.
  
     0.665
ACB26880.1
KEGG: mex:Mext_4155 hypothetical protein.
 
     0.622
ACB25855.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1016 alcohol dehydrogenase GroES domain protein.
 
    0.621
ACB24071.1
PFAM: protein of unknown function DUF156; KEGG: sth:STH2550 hypothetical protein.
       0.520
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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