STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB24540.1PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: eli:ELI_00355 hypothetical protein. (348 aa)    
Predicted Functional Partners:
ACB24541.1
Male sterility domain protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eli:ELI_00360 hypothetical protein.
       0.799
ACB24538.1
PFAM: Radical SAM domain protein; KEGG: bbt:BBta_3378 hypothetical protein.
     0.760
ACB24543.1
KEGG: eli:ELI_00370 hypothetical protein.
 
    0.679
ACB24539.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: eli:ELI_00350 mercuric reductase, putative.
 
     0.630
ACB24542.1
PFAM: glycosyl transferase family 2; KEGG: eli:ELI_00365 hypothetical protein.
 
    0.526
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.444
ACB25142.1
KEGG: mex:Mext_1622 hypothetical protein.
  
     0.440
ACB24118.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.425
ACB22987.1
PFAM: amidinotransferase; KEGG: mex:Mext_3451 non-specific serine/threonine protein kinase.
  
     0.413
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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