STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB24961.1PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase family 2. (390 aa)    
Predicted Functional Partners:
ACB25636.1
PFAM: LmbE family protein; KEGG: mex:Mext_1227 LmbE family protein.
 
     0.801
ACB25307.1
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2 domain.
 
     0.794
ACB25637.1
PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_3847 methyltransferase type 12.
 
    0.784
ACB25638.1
KEGG: mex:Mext_1228 glycosyl transferase family 2.
 
     0.659
ACB27063.1
KEGG: mex:Mext_1231 hypothetical protein.
 
     0.631
ACB24960.1
PFAM: Thioredoxin domain; KEGG: mex:Mext_1773 thioredoxin domain.
       0.570
ACB27099.1
KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.536
ACB23808.1
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: mex:Mext_2037 polysaccharide biosynthesis protein CapD.
 
  
 0.436
ACB22298.1
KEGG: mex:Mext_1370 hypothetical protein.
  
     0.412
ACB26756.1
KEGG: mex:Mext_1370 hypothetical protein.
  
     0.410
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.