STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB25515.1PFAM: DNA polymerase beta domain protein region; KEGG: rpb:RPB_0374 DNA polymerase, beta-like region. (98 aa)    
Predicted Functional Partners:
ACB25514.1
PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_0274 protein of unknown function DUF86.
 
  
 0.965
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.781
ACB25516.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2306 uracil-DNA glycosylase superfamily.
  
    0.640
ACB25517.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_2305 radical SAM domain protein.
       0.640
ACB23015.1
KEGG: syf:Synpcc7942_B2631 hypothetical protein.
  
   
 0.574
ACB25518.1
Conserved hypothetical protein; Modulates RecA activity; Belongs to the RecX family.
       0.484
ACB25512.1
PAS/PAC sensor hybrid histidine kinase; KEGG: mex:Mext_0123 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein.
       0.464
ACB23787.1
Transcriptional modulator of MazE/toxin, MazF; KEGG: xcv:XCVc0002 putative PemK-like protein.
 
     0.456
ACB25675.1
PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29.
 
     0.427
ACB27497.1
KEGG: mex:Mext_3442 hypothetical protein.
 
     0.423
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.